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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007206.1_4317_4804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4317 - 4804

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAC

U12 Branch Point Sequence:

GCTCTCAGAAGT

Flanking Amino Acid:

LPEAEDQQQESAVDRVTSLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

58.3

0.21

1.1

61.1

36.4

Major PPT

75.2

0.57

0.9

72.8

37.5

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

43.6

-0.4

1.9

59.74

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027243

Chromosome:

PEDO01007206.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046360

21 - 4878

4858