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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007255.1_1489_2127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1489 - 2127

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTCAT

U12 Branch Point Sequence:

TCTTCTGTATTT

Flanking Amino Acid:

DVVPKTAENFRQFCTGEFRY

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

0.42

1.4

71.4

45.1

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

50.2

0.08

2.2

74.81

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027942

Chromosome:

PEDO01007255.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017819

21 - 2818

2798

ENSAPLT00000034905

21 - 2818

2798