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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007255.1_2152_2671_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2152 - 2671

Intron Length:

520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGCAGGAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCTTTTTATTT

Flanking Amino Acid:

NFRQFCTGEFRWCSYRL*

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.3

44.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

48.8

-0

1.2

48.1

38.5

Minor 5ss

-2.2

3.3

40.6

45.6

Minor BPS

57.4

0.31

1.6

70.13

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027942

Chromosome:

PEDO01007255.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034905

21 - 2818

2798