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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007262.1_85_945_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

85 - 945

Intron Length:

861

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCGGGTGAG

5'SS Class:

major

3'SS Sequence:

GCAATGGTTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGTTACTGACAG

Flanking Amino Acid:

FPRDNVEDLIGRPVNDGCQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.2

59.2

42.9

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

46.1

-0.2

1.7

45.8

45.5

Minor 5ss

14.4

-4.1

3.5

12.6

28.9

Minor BPS

45.6

-0.4

55.81

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029077

Chromosome:

PEDO01007262.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025316

39 - 1161

1123