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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007326.1_4173_5438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4173 - 5438

Intron Length:

1266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCCCTCACCT

Flanking Amino Acid:

FYHAFSGAQKAETAANRICK

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

38.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

83.6

0.76

0.7

77.7

24.2

Minor 5ss

-0.9

49.2

Minor BPS

47.5

-0.1

1.9

61.08

48.3

Associated Gene:

Gene:

ACTN4

Ensembl Gene ID:

ENSAPLG00000026055

Chromosome:

PEDO01007326.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047122

21 - 10002

9982