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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007326.1_7521_7588_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7521 - 7588

Intron Length:
68

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGGCGG

5'SS Class:
major

3'SS Sequence:
CCCGGCCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTGAC

U12 Branch Point Sequence:
GCCTCCTGACGC

Flanking Amino Acid:
LTHSRREALEKTEKQLETID

Intron Amino Acid Position:
567

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.9
0.61
1.1
55.2
49

Major BPS
68.9
0.47
1
59.2
39.1

Major PPT
61.6
0.26
0.9
53.4
31.1

Minor 5ss
28.8
-2.4
3.4
38.1
46.9

Minor BPS
45
-0.4
2
51.35
45.6

Associated Gene:

Gene:
ACTN4

Ensembl Gene ID:

Chromosome:
PEDO01007326.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 10002
9982

21 - 10002
9982