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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007346.1_1388_1694_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1388 - 1694

Intron Length:

307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGTG

5'SS Class:

major

3'SS Sequence:

TCTTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

ACATCCTGCAGT

Flanking Amino Acid:

YSRLIVHRFKVQLMPPFNLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

70.7

39.5

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

87.1

0.83

0.8

84.6

30.3

Minor 5ss

42.5

-0.8

3.1

57.9

46.8

Minor BPS

46.3

-0.2

2.2

63.93

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028770

Chromosome:

PEDO01007346.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045655

56 - 1817

1762