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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007355.1_3194_5200_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3194 - 5200

Intron Length:

2007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTCTTTCTG

5'SS Class:

weak_major

3'SS Sequence:

GTCCCCGTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

GTCCCCGTTACA

Flanking Amino Acid:

FAARKDWLPTNSLTLPVLAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.3

51.9

44.8

Major BPS

0.52

1.5

79.6

35.6

Major PPT

71.9

0.49

0.9

64.1

36.8

Minor 5ss

41.1

-1

2.8

50.6

39.9

Minor BPS

47.1

-0.2

2.3

61.73

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021322

Chromosome:

PEDO01007355.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046288

1088 - 5298

4211