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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007365.1_127_301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127 - 301

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

CTGGCAGTGATG

Flanking Amino Acid:

YILGTIEILLAYIFPPMAIF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

87.5

0.84

0.6

85.4

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

39.4

-0.9

2.2

42.49

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013809

Chromosome:

PEDO01007365.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014404

13 - 7886

7874