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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007365.1_2424_3252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2424 - 3252

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAG

U12 Branch Point Sequence:

CAGCCCGGCACC

Flanking Amino Acid:

LVGIYFPSVTGIMAGSNRSG

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

44.5

-0.3

1.6

55.8

41.7

Major PPT

69.2

0.43

0.8

60.1

35.4

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

38.5

-0.9

2.3

45.59

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013809

Chromosome:

PEDO01007365.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014404

13 - 7886

7874