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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007365.1_4606_5534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4606 - 5534

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

GAGCCCCTAACG

Flanking Amino Acid:

SRDGIVPFLRVFGHGKANGE

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

70.5

40.5

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

73.3

0.52

0.9

36.3

Minor 5ss

40.5

-1.1

3.4

50.6

46.1

Minor BPS

52.1

-0

1.8

56.23

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013809

Chromosome:

PEDO01007365.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014404

13 - 7886

7874