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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007423.1_1180_1722_F

Intron Information:

Intron Rank:

144499

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1180 - 1722

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCCTTCCC

5'SS Class:

weak_major

3'SS Sequence:

TCCAAATTTTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TTGTACTCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.4

53.7

43.7

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

51.7

0.04

1.7

61.7

43.2

Minor 5ss

29.9

-2.3

2.8

37.9

39.3

Minor BPS

55.9

0.18

1.9

70.39

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027863

Chromosome:

PEDO01007423.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020142

21 - 2770

2750