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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007435.1_1106_1395_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1106 - 1395

Intron Length:
290

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTATGTCCT

5'SS Class:
major

3'SS Sequence:
CTGCTTTGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAG

U12 Branch Point Sequence:
TCTCCCTTCTCC

Flanking Amino Acid:
RWCNGSLFNNRFDIQGNGQC

Intron Amino Acid Position:
192

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.9
0.66
1
68.4
42.3

Major BPS
55.8
0.14
1.6
65.3
43.7

Major PPT
76.6
0.6
1
72.2
37.8

Minor 5ss
43.4
-0.7
2.8
60.7
43.6

Minor BPS
43.1
-0.5
3.6
67.52
44.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01007435.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

749 - 2143
1395

749 - 2143
1395