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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007437.1_2542_2904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2542 - 2904

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

GCTCGCTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCGAAA

U12 Branch Point Sequence:

GGCTCCGAAACG

Flanking Amino Acid:

CDSIADPTLRGAVGNRRAQG

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

44.2

Major BPS

49.1

-0

1.4

57.8

37.4

Major PPT

71.6

0.49

0.9

64.6

36.4

Minor 5ss

31.1

-2.2

3.2

39.3

46.1

Minor BPS

45.6

-0.4

2.3

52.47

47.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018661

Chromosome:

PEDO01007437.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023890

371 - 4042

3672