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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007439.1_1472_1631_F

Intron Information:

Intron Rank:

141284

Intron Class:

major

Intron Phase:

Intron Coordinates:

1472 - 1631

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

GTCATTGTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

62.7

0.32

1.4

63.4

Major PPT

80.8

0.69

0.9

72.8

42.2

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

41.8

-0.6

2.1

50.54

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026066

Chromosome:

PEDO01007439.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046731

1210 - 2164

955