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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007456.1_169_803_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

169 - 803

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCCCGGCGG

5'SS Class:

major

3'SS Sequence:

CGATGTCGCCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGCGAT

U12 Branch Point Sequence:

GCCGCCGCGATG

Flanking Amino Acid:

VRANPPSRVAELLLQRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.24

1.3

44.7

42.8

Major BPS

43.5

-0.4

1.4

35.5

41.6

Major PPT

-0.2

1.7

42.3

Minor 5ss

14.7

-4.1

3.6

21.4

37.2

Minor BPS

37.2

-1.1

2.1

34.45

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024173

Chromosome:

PEDO01007456.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018836

146 - 1943

1798