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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007469.1_5711_6201_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5711 - 6201

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCTCGGGCG

5'SS Class:

weak_major

3'SS Sequence:

TCCTCGTGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAG

U12 Branch Point Sequence:

TCCTCGTGCACA

Flanking Amino Acid:

GEEFPEEVRPAPSSWAESSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.4

53.8

42.3

Major BPS

45.5

-0.2

1.5

54.7

43.1

Major PPT

68.8

0.42

63.3

37.1

Minor 5ss

14.1

-4.2

3.6

13.7

28.2

Minor BPS

44.3

-0.4

2.5

59.45

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019596

Chromosome:

PEDO01007469.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038318

5485 - 6269

785