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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007499.1_7437_7724_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7437 - 7724

Intron Length:
288

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAAGGCGG

5'SS Class:
major

3'SS Sequence:
ATTCTGGTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTAAT

U12 Branch Point Sequence:
GTGTGCATGACT

Flanking Amino Acid:
ITLLNTPFTLARFVNSSWVF

Intron Amino Acid Position:
130

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.9
0.66
1
57
47.3

Major BPS
79.3
0.73
1.1
77.9
34.9

Major PPT
75.4
0.57
1
65.6
44.9

Minor 5ss
30.3
-2.3
3.2
35.4
42.3

Minor BPS
50.1
0.08
2.1
72.97
43.9

Associated Gene:

Gene:
GPR83

Ensembl Gene ID:

Chromosome:
PEDO01007499.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7050 - 9611
2562