Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007533.1_451_704_F

Intron Information:

Intron Rank:

134484

Intron Class:

major

Intron Phase:

Intron Coordinates:

451 - 704

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

CCCTCTCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGAGTAT

U12 Branch Point Sequence:

GAGTATGGGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

44.4

-0.3

1.4

37.5

41.8

Major PPT

73.4

0.53

0.9

68.1

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

38.5

-0.9

2.1

44.59

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022287

Chromosome:

PEDO01007533.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045205

21 - 991

971

ENSAPLT00000037919

21 - 991

971

ENSAPLT00000018677

21 - 991

971