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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007543.1_6845_9129_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6845 - 9129

Intron Length:

2285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGAAACT

5'SS Class:

major

3'SS Sequence:

GGTGTCAGCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTCAG

U12 Branch Point Sequence:

CTCTGCCCAGGT

Flanking Amino Acid:

VLIWEAAPGSRSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

60.2

38.3

Major BPS

47.3

-0.1

1.7

57.1

49.4

Major PPT

44.6

-0.3

1.7

42.7

42.2

Minor 5ss

28.8

-2.4

3.2

37.4

42.2

Minor BPS

35.1

-1

2.3

52.27

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008655

Chromosome:

PEDO01007543.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009027

6834 - 11878

5045