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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007543.1_8703_9315_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8703 - 9315

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGTGAGCA

5'SS Class:

weak_major

3'SS Sequence:

GATGCCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

CCCTCGGGAAGC

Flanking Amino Acid:

QPYLQTVPGTGAGGRRGSVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.17

1.1

50.8

33.5

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

66.8

0.38

58.1

42.7

Minor 5ss

34.3

-1.8

3.4

48.6

47.1

Minor BPS

34.5

-1.1

2.6

41.78

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008655

Chromosome:

PEDO01007543.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035761

8625 - 11878

3254