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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007568.1_3465_4143_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3465 - 4143

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TCTTCAATAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

78.2

0.7

79.9

32.6

Major PPT

0.47

75.5

33.3

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

61.6

0.44

1.9

82.17

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027047

Chromosome:

PEDO01007568.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039090

827 - 4309

3483