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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007631.1_1373_1504_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1373 - 1504

Intron Length:
132

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTGAGTCGG

5'SS Class:
major

3'SS Sequence:
CTCCCCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTGAT

U12 Branch Point Sequence:
CTTCCCCTGATT

Flanking Amino Acid:
VNAIILAQKNMLDRFEKTNE

Intron Amino Acid Position:
32

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.8
0.61
1.1
61.7
44.4

Major BPS
66.4
0.41
1.1
56.9
40.5

Major PPT
70.7
0.47
0.7
61.5
29

Minor 5ss
30.6
-2.2
2.9
36.9
40.4

Minor BPS
59.3
0.37
1.7
77.5
39.1

Associated Gene:

Gene:
KXD1

Ensembl Gene ID:

Chromosome:
PEDO01007631.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2410
2390

21 - 2410
2390

21 - 2410
2390