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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007631.1_952_1219_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
952 - 1219

Intron Length:
268

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTAGGCACC

5'SS Class:
major

3'SS Sequence:
CCTCTTCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGTGAA

U12 Branch Point Sequence:
TTGGTGTGAACT

Flanking Amino Acid:
KDLDSIFRRIRTLKGKLAKQ

Intron Amino Acid Position:
83

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.7
0.49
1.1
61
44

Major BPS
54.3
0.11
1.4
49.1
46.3

Major PPT
77.8
0.63
0.7
72.6
25.6

Minor 5ss
39.7
-1.2
3.1
53.4
43.7

Minor BPS
48.3
-0
2.2
71.85
45.3

Associated Gene:

Gene:
KXD1

Ensembl Gene ID:

Chromosome:
PEDO01007631.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2410
2390

21 - 2410
2390