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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007661.1_4915_5015_F

Intron Information:

Intron Rank:

125020

Intron Class:

major

Intron Phase:

Intron Coordinates:

4915 - 5015

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGCC

5'SS Class:

major

3'SS Sequence:

TTTCTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACACAA

U12 Branch Point Sequence:

TCCTCGATGAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

63.2

36.7

Major BPS

47.2

-0.1

1.1

52.9

34.1

Major PPT

92.7

0.96

0.6

88.4

21.2

Minor 5ss

24.9

-2.9

3.3

32.9

42.4

Minor BPS

40.1

-0.9

2.5

46.84

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017322

Chromosome:

PEDO01007661.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033169

4729 - 8314

3586