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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007661.1_5057_7736_F

Intron Information:

Intron Rank:

125019

Intron Class:

major

Intron Phase:

Intron Coordinates:

5057 - 7736

Intron Length:

2680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTTCGAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTAACAGTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

63.2

0.3

1.7

69.5

41.7

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

40.9

-0.7

2.4

54.02

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017322

Chromosome:

PEDO01007661.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033169

4729 - 8314

3586

ENSAPLT00000023830

3822 - 8314

4493