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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007667.1_2705_2985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2705 - 2985

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCGTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

ACCTCCTGACCC

Flanking Amino Acid:

DAFTETKHFEAGSGFTVRCE

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

68.9

0.47

59.2

39.1

Major PPT

65.9

0.36

57.2

43.2

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

52.7

0.06

1.8

61.28

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028515

Chromosome:

PEDO01007667.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044398

1603 - 5206

3604