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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007667.1_2891_2985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2891 - 2985

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGCTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGGAC

U12 Branch Point Sequence:

GGGTCTGGGACC

Flanking Amino Acid:

DAFTETKHFEGCEDGCTLIP

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

43.7

-0.3

1.4

38.2

41.7

Major PPT

70.7

0.47

0.9

65.4

36.2

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

43.3

-0.5

2.1

51.49

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028515

Chromosome:

PEDO01007667.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039927

1603 - 5206

3604

ENSAPLT00000029982

1603 - 5206

3604