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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007667.1_3834_4054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3834 - 4054

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCGTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

ACTCACTGCACC

Flanking Amino Acid:

GCCPYSHYFRSGVIGSGLCI

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

64.9

0.37

29.8

Major PPT

67.4

0.39

0.8

60.5

29.4

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

44.9

-0.4

56.38

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028515

Chromosome:

PEDO01007667.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039927

1603 - 5206

3604

ENSAPLT00000029982

1603 - 5206

3604