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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007674.1_609_3465_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

609 - 3465

Intron Length:

2857

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAACGGGG

5'SS Class:

strong_major

3'SS Sequence:

CAACAGCCGGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTACAG

U12 Branch Point Sequence:

TCTACAGCAACA

Flanking Amino Acid:

MAAKSSISGQMQQAGPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.1

66.5

42.3

Major BPS

48.5

-0

1.6

62.9

43.3

Major PPT

50.6

0.01

1.1

43.2

37.8

Minor 5ss

23.8

-3

4.2

37.8

47.1

Minor BPS

44.1

-0.4

2.4

61.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021533

Chromosome:

PEDO01007674.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028340

586 - 4181

3596