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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007679.1_1415_1556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1415 - 1556

Intron Length:

142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

CATCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TCTTCTGCATCC

Flanking Amino Acid:

SESGKRRTPDRTKENGLDRD

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

68.5

0.42

0.8

58.4

32.6

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

44.9

-0.4

2.3

61.83

44.1

Associated Gene:

Gene:

CBFA2T3

Ensembl Gene ID:

ENSAPLG00000018441

Chromosome:

PEDO01007679.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026905

203 - 3742

3540

ENSAPLT00000018629

203 - 4291

4089

ENSAPLT00000033558

639 - 4291

3653

ENSAPLT00000030640

203 - 2462

2260