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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007679.1_1739_2751_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1739 - 2751

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGGAT

U12 Branch Point Sequence:

GGGCTCTGGATT

Flanking Amino Acid:

LRPFVIPFLKANLPLLQREL

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

58.9

0.22

1.5

59.3

47.1

Major PPT

72.1

0.5

0.8

65.1

30.5

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

47.5

-0.1

1.4

58.22

38.7

Associated Gene:

Gene:

CBFA2T3

Ensembl Gene ID:

ENSAPLG00000018441

Chromosome:

PEDO01007679.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033558

639 - 4291

3653

ENSAPLT00000026905

203 - 3742

3540

ENSAPLT00000018629

203 - 4291

4089