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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007679.1_1837_2458_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1837 - 2458

Intron Length:

622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTTAGCAGA

5'SS Class:

weak_major

3'SS Sequence:

TCCCCAAAGTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

GGTCCCCAAAGT

Flanking Amino Acid:

PQLEGWGDQGW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.6

0.06

1.4

53.7

44.9

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

44.1

-0.3

1.7

47.7

38.5

Minor 5ss

36.6

-1.5

2.7

42.3

38.7

Minor BPS

44.3

-0.3

2.2

63.99

45.5

Associated Gene:

Gene:

CBFA2T3

Ensembl Gene ID:

ENSAPLG00000018441

Chromosome:

PEDO01007679.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030640

203 - 2462

2260