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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007716.1_4589_4893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4589 - 4893

Intron Length:

305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCCCGTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAT

U12 Branch Point Sequence:

TCTCGTTCCATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.2

35.1

Major BPS

59.5

0.24

1.5

72.5

43.5

Major PPT

67.6

0.4

0.9

60.2

35.4

Minor 5ss

33.8

-1.8

3.2

40.4

Minor BPS

40.5

-0.7

2.1

51.09

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015275

Chromosome:

PEDO01007716.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044262

3141 - 8990

5850

ENSAPLT00000015946

2834 - 13514

10681