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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007716.1_4957_5094_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4957 - 5094

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTCG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

TGTTTTTTCATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

39.3

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

83.6

0.76

0.7

80.1

Minor 5ss

33.7

-1.9

40.8

45.6

Minor BPS

58.8

0.27

1.7

70.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015275

Chromosome:

PEDO01007716.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044262

3141 - 8990

5850

ENSAPLT00000015946

2834 - 13514

10681