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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007716.1_5189_5567_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5189 - 5567

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCCC

5'SS Class:

major

3'SS Sequence:

CCTTCCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAC

U12 Branch Point Sequence:

TTACGTTTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

63.8

40.7

Major BPS

57.6

0.19

1.1

49.1

37.7

Major PPT

0.65

0.7

69.7

31.1

Minor 5ss

31.4

-2.1

3.3

42.6

44.4

Minor BPS

48.6

-0

69.65

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015275

Chromosome:

PEDO01007716.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015946

2834 - 13514

10681

ENSAPLT00000044262

3141 - 8990

5850