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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007716.1_7335_10042_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

7335 - 10042

Intron Length:

2708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

ACCCGGTGACCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCCCAC

U12 Branch Point Sequence:

TCCCCCCGAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

1.2

61.8

35.9

Major PPT

51.7

0.04

1.1

42.7

41.6

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

47.9

-0.3

1.9

54.6

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015275

Chromosome:

PEDO01007716.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015946

2834 - 13514

10681