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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007784.1_470_1504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

470 - 1504

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTACGTAGA

5'SS Class:

major

3'SS Sequence:

TCTCCCCCGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

GTGCTCTCACCC

Flanking Amino Acid:

SGKLAIFTDDIKMDSQMTKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

71.2

40.6

Major BPS

72.7

0.56

30.1

Major PPT

69.4

0.44

0.9

62.2

34.7

Minor 5ss

36.5

-1.5

46.2

42.5

Minor BPS

46.9

-0.2

1.8

56.45

41.9

Associated Gene:

Gene:

STX1B

Ensembl Gene ID:

ENSAPLG00000016813

Chromosome:

PEDO01007784.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040813

25 - 1843

1819