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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007788.1_1141_1323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1141 - 1323

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

GTGCCCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TCTGTCTCACCC

Flanking Amino Acid:

TEDQVRHLLLQADPKKMFPE

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.5

37.5

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

0.52

0.9

65.9

35.9

Minor 5ss

45.3

-0.5

2.8

57.3

41.5

Minor BPS

48.3

-0.1

1.9

61.43

44.4

Associated Gene:

Gene:

CD74

Ensembl Gene ID:

ENSAPLG00000015926

Chromosome:

PEDO01007788.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019640

21 - 3360

3340

ENSAPLT00000016643

21 - 3360

3340

ENSAPLT00000041900

21 - 3360

3340