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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007788.1_1642_2156_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1642 - 2156

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCGGG

5'SS Class:

major

3'SS Sequence:

TTTATTGCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

DERKAIPAEKVQTKCQAEAN

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.2

47.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.3

0.52

0.9

66.2

40.6

Minor 5ss

41.3

-1

3.3

55.9

48.3

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

CD74

Ensembl Gene ID:

ENSAPLG00000015926

Chromosome:

PEDO01007788.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016643

21 - 3360

3340

ENSAPLT00000041900

21 - 3360

3340