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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007788.1_2346_2584_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2346 - 2584

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TGTCCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

CCACGCTGAGCT

Flanking Amino Acid:

TATRGELDCSGAALTEPDEM

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

64.7

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

77.2

0.61

0.8

70.2

30.7

Minor 5ss

31.2

-2.1

3.4

34.3

Minor BPS

42.4

-0.4

55.09

46.3

Associated Gene:

Gene:

CD74

Ensembl Gene ID:

ENSAPLG00000015926

Chromosome:

PEDO01007788.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041900

21 - 3360

3340

ENSAPLT00000016643

21 - 3360

3340