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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007788.1_387_508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

387 - 508

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGATTT

5'SS Class:

major

3'SS Sequence:

CCGTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

GCGATTGTGACC

Flanking Amino Acid:

AFVWVRASSSESAFGRRAAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

71.3

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

0.41

0.9

61.3

35.1

Minor 5ss

39.7

-1.2

3.3

52.9

44.9

Minor BPS

42.2

-0.6

1.9

45.53

37.7

Associated Gene:

Gene:

CD74

Ensembl Gene ID:

ENSAPLG00000015926

Chromosome:

PEDO01007788.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018618

21 - 2943

2923