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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007788.1_685_895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

685 - 895

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTCAGTACC

5'SS Class:

major

3'SS Sequence:

CCCCCCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGCTCCTCACAC

Flanking Amino Acid:

LEALQRKLPKSSKSAGNMKM

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.8

0.28

1.3

63.6

39.2

Major BPS

72.4

0.56

73.5

32.5

Major PPT

65.1

0.34

0.9

60.6

29.4

Minor 5ss

33.7

-1.9

2.5

35.8

33.4

Minor BPS

48.5

-0.1

1.9

60.74

44.1

Associated Gene:

Gene:

CD74

Ensembl Gene ID:

ENSAPLG00000015926

Chromosome:

PEDO01007788.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041900

21 - 3360

3340

ENSAPLT00000019640

21 - 3360

3340

ENSAPLT00000018618

21 - 2943

2923