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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007795.1_1468_1547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1468 - 1547

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGGAC

5'SS Class:

major

3'SS Sequence:

TCCCCCCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CCCCCCCTGACA

Flanking Amino Acid:

AVPGTPPHKKFRSLFFGSVM

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

63.5

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

70.6

0.46

0.7

61.4

29.1

Minor 5ss

22.7

-3.1

3.5

30.5

43.7

Minor BPS

49.3

-0

1.7

56.51

42.8

Associated Gene:

Gene:

RAD9A

Ensembl Gene ID:

ENSAPLG00000018732

Chromosome:

PEDO01007795.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047516

1369 - 3145

1777

ENSAPLT00000042778

1063 - 3209

2147