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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007795.1_2065_2147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2065 - 2147

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CATCTCCGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TCGGTCTCATCT

Flanking Amino Acid:

RITFCLKEFRGLLTFAEASN

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

66.5

0.37

0.9

57.8

38.1

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

-0.1

1.9

63.01

47.4

Associated Gene:

Gene:

RAD9A

Ensembl Gene ID:

ENSAPLG00000018732

Chromosome:

PEDO01007795.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042778

1063 - 3209

2147

ENSAPLT00000047516

1369 - 3145

1777