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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007795.1_2434_2521_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2434 - 2521

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGAGCA

5'SS Class:

major

3'SS Sequence:

CCGTGCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACAAAG

U12 Branch Point Sequence:

AAGCGCTGAGCC

Flanking Amino Acid:

RCASSLCAPARVLAEAVVHF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

65.2

34.5

Major BPS

43.4

-0.4

1.4

48.6

33.2

Major PPT

60.7

0.24

51.6

38.1

Minor 5ss

25.8

-2.8

3.1

31.5

42.2

Minor BPS

42.3

-0.6

48.76

40.6

Associated Gene:

Gene:

RAD9A

Ensembl Gene ID:

ENSAPLG00000018732

Chromosome:

PEDO01007795.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047516

1369 - 3145

1777

ENSAPLT00000042778

1063 - 3209

2147