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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007795.1_2622_2700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2622 - 2700

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CACCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTCAC

U12 Branch Point Sequence:

CCACCCGTCACC

Flanking Amino Acid:

RLVVQLHCKYGITRTHNLAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

63.5

42.9

Major BPS

1.2

54.6

40.8

Major PPT

64.4

0.32

0.8

30.5

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

43.7

-0.5

2.3

52.03

45.1

Associated Gene:

Gene:

RAD9A

Ensembl Gene ID:

ENSAPLG00000018732

Chromosome:

PEDO01007795.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047516

1369 - 3145

1777

ENSAPLT00000042778

1063 - 3209

2147