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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007795.1_421_684_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

421 - 684

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCCCG

5'SS Class:

major

3'SS Sequence:

CGCGGCCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

GTTGCCCCAGCT

Flanking Amino Acid:

DLDLICRAHQVVEDGYEFFA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.3

48.3

47.8

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

58.8

0.2

0.9

34.2

Minor 5ss

42.7

-0.8

3.1

57.6

46.6

Minor BPS

-0.2

2.2

70.17

Associated Gene:

Gene:

PPP1CA

Ensembl Gene ID:

ENSAPLG00000013896

Chromosome:

PEDO01007795.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014469

220 - 1029

810