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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007826.1_1048_1133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1048 - 1133

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCCCAA

U12 Branch Point Sequence:

CGGAGCCCAACC

Flanking Amino Acid:

RALPCLTAEQVAEEQRKWLH

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

70.2

37.7

Major BPS

45.7

-0.2

1.2

50.2

36.7

Major PPT

73.3

0.52

0.7

64.8

30.7

Minor 5ss

31.7

-2.1

37.9

46.9

Minor BPS

39.1

-0.8

2.1

44.87

42.9

Associated Gene:

Gene:

TM6SF2

Ensembl Gene ID:

ENSAPLG00000000927

Chromosome:

PEDO01007826.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001039

54 - 3141

3088