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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007826.1_1438_1537_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1438 - 1537

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

CCCGCTCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

GACGCGGTGACC

Flanking Amino Acid:

RDPVAYPKVQMLLYLFYVLP

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

63.1

0.29

0.9

54.6

35.2

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

38.8

-0.9

2.5

46.69

42.9

Associated Gene:

Gene:

TM6SF2

Ensembl Gene ID:

ENSAPLG00000000927

Chromosome:

PEDO01007826.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026469

78 - 2361

2284

ENSAPLT00000001039

54 - 3141

3088